Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015945687.1_cds_XP_016488107.1_78776
CDS Infomation

[gene=LOC107808132] [db_xref=GeneID:107808132] [protein=vacuolar protein-sorting protein bro1-like] [protein_id=XP_016488107.1] [location=join(13284..13515,15996..16108,16210..16581,17363..18092,18405..18475)] [gbkey=CDS]
Sequence

ATGGGCAAAGTAGAAGAAGAGCATCAATTACCAATATCAACAGTAGGTGCAAATGGTACA
GACCAAAATGTAGAGAATAATAGTTGCGGCAGCAGATTCAGTGGGTTTGTGAAGTTTAGA
TGTGTATTTGCTTTGCTATTTGGTGGAGCTGTTTTGCTTTCTGCTATATTCTTGTTGCCT
TTTTTTCACACTGGAGATCTTGGGGATCTAGATCTAGACCCCAAATTTAGAGGTCATGAT
ATAGTAGCCAGTTTCATGCTTGAGAAGCCAGCTTCTTTGATGGAGGACTATACCTTGCAA
CTTGAAGATGATATTTTTGATGAAATAAGTGTTTCCAACACTAAAGTGGAAATAATATCA
TTGGAAAATATAACTGGATCAAACATAACAAGGGTTGTCTTCGCTGTTGATTCTGATTTG
AAAAATACGAGGATCTCTCCAACTGCTCTGAGTCTAGTCAGATCAGAATTTGAAACTGTA
ATTACTCACCCGTCATTTCTGCACCTGACGGCATCTTTGTTCGGGGATCCTTTTTCTTTC
GATGTGCTGAAACTCAGAGGAGGGATTACAGTGATCCCTAAACAGAGTGGATTCCTCATG
CAGAATGTGCAGATCCGATTCAACTTCACATTGAACTCCTCCATCGATGAAATTCAAGAT
AAATTTGATGAATTAACAAGCCAGCTGAAATCAGGGGTACACCTTGCATCATACGAGAAC
TTGTATATCAAATTGACTAATACAAGAGGCTCCACGGTGAATCCTCCCACTATTGTTCAG
TGTCAAGTTCTTTTAGCAGTTGGGATAAATCCTTCCAATTCTAGGTTGAAGCAGTTGGCT
CAGACCATTGGTTCTAATTCTAAAAACCTTGGCCTTAATAACACCGTATTTGGGAGGGTT
AAACAAGTTAGCCTGTCTTCTATTTTGCAACATTCTCTTGGTAGTCCTTCACCTTCTCCG
GCTCCTCAACCTTATCACCCCCATCAACACCATCACCACCACAGTCGCCACCACCACCGC
CAAGGCTCGAATGTTGCTCCCGCAATTTCACCTGCTCCGAGGGCTGAGAAAAGTGGATCA
GTTAGCGGGAAAGTGTCACCAATATTGGCACCTGTGCCATCGTCTGCACCAGTGGTTGCA
CCTGCCCCTATACATTCAACTCACAAAGGTCATGTGGCGAAACCTCCTTGTCATTTCGAG
AGATTCCCAAGGAAGGCGACTAGTCATCCTCCCGTACTACCACCTATTAGACCACCAGTC
CCTGCACCTCATATTGCTCCCTCTCCACAACAGAAAACGCATGCTCCAACACCAGTCCCG
CATGAAATCTCTGCGTCGAGCCCATTACCCTCTGTTGTGTATGCTCACACTCAGCCTCCT
CCAGTGACACCTTCAGTTGCAGAGCCTCCTCACAGAATACCTTCAGGTTCAAAATCGCCA
TCTTCATCTTCTACAGCGATCTTTTCTTCAAGCTTGTGGGCGCTCTCGCTGTTTCTTCTT
CTTGTACCACATTTATAG

Peptide Sequence

PEP ID

XP_016488107.1
PEP Infomation

PREDICTED: vacuolar protein-sorting protein bro1-like [Nicotiana tabacum]
Sequence

MGKVEEEHQLPISTVGANGTDQNVENNSCGSRFSGFVKFRCVFALLFGGAVLLSAIFLLP
FFHTGDLGDLDLDPKFRGHDIVASFMLEKPASLMEDYTLQLEDDIFDEISVSNTKVEIIS
LENITGSNITRVVFAVDSDLKNTRISPTALSLVRSEFETVITHPSFLHLTASLFGDPFSF
DVLKLRGGITVIPKQSGFLMQNVQIRFNFTLNSSIDEIQDKFDELTSQLKSGVHLASYEN
LYIKLTNTRGSTVNPPTIVQCQVLLAVGINPSNSRLKQLAQTIGSNSKNLGLNNTVFGRV
KQVSLSSILQHSLGSPSPSPAPQPYHPHQHHHHHSRHHHRQGSNVAPAISPAPRAEKSGS
VSGKVSPILAPVPSSAPVVAPAPIHSTHKGHVAKPPCHFERFPRKATSHPPVLPPIRPPV
PAPHIAPSPQQKTHAPTPVPHEISASSPLPSVVYAHTQPPPVTPSVAEPPHRIPSGSKSP
SSSSTAIFSSSLWALSLFLLLVPHL

Transcript Sequence

Gene sequence data has not been registered.